3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF07535

Details:

PFam ID : PF07535

PFam Domain Description : DBF zinc finger

Number of Sequence in 50% Dataset : 15

Number of Sequence in Full Dataset : 101

Average sequence length: 47.7

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07535	A0DVA7_PARTE_99_138	100

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07535	B7QNV9_IXOSC_256_306	100

Sequence based PCA Plot of the family - PF07535 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=1 Length=23
Motif2 Start=27 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay