3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF07533

Details:

PFam ID : PF07533

PFam Domain Description : BRK domain

Number of Sequence in 50% Dataset : 9

Number of Sequence in Full Dataset : 90

Average sequence length: 44.9

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07533	F1QW70_DANRE_2008_2031	62.5

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07533	E3LXK9_CAERE_42_86	94.3

Sequence based PCA Plot of the family - PF07533 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=12 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay