3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF07531

Details:

PFam ID : PF07531

PFam Domain Description : NHR1 homology to TAF

Number of Sequence in 50% Dataset : 11

Number of Sequence in Full Dataset : 56

Average sequence length: 87.5

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07531	E2AQX2_9HYME_1_54	50

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07531	O61707_CAEEL_101_199	100

Sequence based PCA Plot of the family - PF07531 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=36

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay