3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF07485

Details:

PFam ID : PF07485

PFam Domain Description : Domain of Unknown Function (DUF1259)

Number of Sequence in 50% Dataset : 25

Number of Sequence in Full Dataset : 114

Average sequence length: 114.5

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07485	C0ZEU7_BREBN_1_75	75

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07485	D1YY60_METPS_51_173	100

Sequence based PCA Plot of the family - PF07485 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=36

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay