3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF07461

Details:

PFam ID : PF07461

PFam Domain Description : Nicotine adenine dinucleotide glycohydrolase (NADase)

Number of Sequence in 50% Dataset : 7

Number of Sequence in Full Dataset : 7

Average sequence length: 202.8

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07461	D7S050_STRPY_1_446	50

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07461	B0SCP5_LEPBA_31_188	100

Sequence based PCA Plot of the family - PF07461 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=19 Length=8
Motif2 Start=10 Length=8
Motif3 Start=1 Length=8
Motif4 Start=375 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay