3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF07397

Details:

PFam ID : PF07397

PFam Domain Description : Repeat of unknown function (DUF1502)

Number of Sequence in 50% Dataset : 4

Number of Sequence in Full Dataset : 4

Average sequence length: 22.5

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07397	B8MNK5_TALSN_95_116	100

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07397	O41971_MHV68_438_471	100

Sequence based PCA Plot of the family - PF07397 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=5 Length=18

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay