3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF07391

Details:

PFam ID : PF07391

PFam Domain Description : NPR nonapeptide repeat (2 copies)

Number of Sequence in 50% Dataset : 125

Number of Sequence in Full Dataset : 321

Average sequence length: 16.9

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07391	A9CJV4_AGRT5_234_297	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07391	Q8I6U6_PLAF7_5520_5536	93.7

Sequence based PCA Plot of the family - PF07391 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay