3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF07390

Details:

PFam ID : PF07390

PFam Domain Description : Mycoplasma P30 protein

Number of Sequence in 50% Dataset : 5

Number of Sequence in Full Dataset : 5

Average sequence length: 85.8

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07390	A9CJV4_AGRT5_234_297	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07390	Q9JFT3_9POXV_1_99	100

Sequence based PCA Plot of the family - PF07390 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay