3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF07353 Details: PFam ID : PF07353 PFam Domain Description : Uroplakin II Number of Sequence in 50% Dataset : 8 Number of Sequence in Full Dataset : 10 Average sequence length: 125.7 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF07353Q9TU13_RABIT_1_13157.1 HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF07353D4A0E6_RAT_1_184100 Sequence based PCA Plot of the family - PF07353 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 4 motifsMotif1 Start=28 Length=8Motif2 Start=19 Length=8Motif3 Start=10 Length=8Motif4 Start=1 Length=8 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF07353
PFam Domain Description : Uroplakin II
Number of Sequence in 50% Dataset : 8
Number of Sequence in Full Dataset : 10
Average sequence length: 125.7
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER