3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF07281

Details:

PFam ID : PF07281

PFam Domain Description : Insulin-induced protein (INSIG)

Number of Sequence in 50% Dataset : 29

Number of Sequence in Full Dataset : 94

Average sequence length: 187.7

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07281	B7FIR5_MEDTR_51_238	78.5

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07281	INS1_SCHPO_93_281	100

Sequence based PCA Plot of the family - PF07281 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 3 motifs

Motif1 Start=21 Length=18
Motif2 Start=12 Length=8
Motif3 Start=3 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay