3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF07264

Details:

PFam ID : PF07264

PFam Domain Description : Etoposide-induced protein 2.4 (EI24)

Number of Sequence in 50% Dataset : 172

Number of Sequence in Full Dataset : 576

Average sequence length: 214.3

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07264	Q30E91_9META_1_192	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07264	A5L8R9_9GAMM_4_114	99.3

Sequence based PCA Plot of the family - PF07264 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 3 motifs

Motif1 Start=19 Length=18
Motif2 Start=10 Length=8
Motif3 Start=1 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay