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3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF07250
Details:

PFam ID : PF07250

PFam Domain Description : Glyoxal oxidase N-terminus

Number of Sequence in 50% Dataset : 56

Number of Sequence in Full Dataset : 228

Average sequence length: 214.4

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:
Pfam IDBest ProfileCoverage of Best Profile
PF07250D9VMP2_9ACTO_187_37389.0
HMMER Based Coverage Results:
Pfam IDBest ProfileCoverage of Best Profile
PF07250F2X8C7_CAPAN_54_301100
Sequence based PCA Plot of the family - PF07250 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=24 Length=8
Motif2 Start=15 Length=8
Motif3 Start=51 Length=8
Motif4 Start=6 Length=8
Download PSSM/HMM Models/Alignment:
Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay