3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF07250 Details: PFam ID : PF07250 PFam Domain Description : Glyoxal oxidase N-terminus Number of Sequence in 50% Dataset : 56 Number of Sequence in Full Dataset : 228 Average sequence length: 214.4 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF07250D9VMP2_9ACTO_187_37389.0 HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF07250F2X8C7_CAPAN_54_301100 Sequence based PCA Plot of the family - PF07250 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 4 motifsMotif1 Start=24 Length=8Motif2 Start=15 Length=8Motif3 Start=51 Length=8Motif4 Start=6 Length=8 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF07250
PFam Domain Description : Glyoxal oxidase N-terminus
Number of Sequence in 50% Dataset : 56
Number of Sequence in Full Dataset : 228
Average sequence length: 214.4
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER