3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF07231

Details:

PFam ID : PF07231

PFam Domain Description : Hs1pro-1 N-terminus

Number of Sequence in 50% Dataset : 3

Number of Sequence in Full Dataset : 26

Average sequence length: 166.6

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07231	Q6QIS6_9VIRU_1_154	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07231	D7LV92_ARALL_1_165	100

Sequence based PCA Plot of the family - PF07231 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=1 Length=18
Motif2 Start=28 Length=21

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay