3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF07212

Details:

PFam ID : PF07212

PFam Domain Description : Hyaluronidase protein (HylP)

Number of Sequence in 50% Dataset : 6

Number of Sequence in Full Dataset : 19

Average sequence length: 211.7

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07212	A6CAV2_9PLAN_31_108	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07212	B5XL86_STRPZ_93_323	100

Sequence based PCA Plot of the family - PF07212 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=28 Length=8
Motif2 Start=19 Length=8
Motif3 Start=10 Length=8
Motif4 Start=1 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay