3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF07153

Details:

PFam ID : PF07153

PFam Domain Description : Marek's disease-like virus SORF3 protein

Number of Sequence in 50% Dataset : 7

Number of Sequence in Full Dataset : 8

Average sequence length: 204.1

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07153	ORF3_PSHV1_99_276	50

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07153	ORF3_PSHV1_99_276	100

Sequence based PCA Plot of the family - PF07153 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=36

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay