3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF07055

Details:

PFam ID : PF07055

PFam Domain Description : Enoyl reductase FAD binding domain

Number of Sequence in 50% Dataset : 8

Number of Sequence in Full Dataset : 188

Average sequence length: 64.5

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07055	D2VYL3_NAEGR_168_299	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07055	A9NFB1_ACHLI_322_386	100

Sequence based PCA Plot of the family - PF07055 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 3 motifs

Motif1 Start=27 Length=8
Motif2 Start=47 Length=19
Motif3 Start=7 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay