3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF07034

Details:

PFam ID : PF07034

PFam Domain Description : Origin recognition complex (ORC) subunit 3 N-terminus

Number of Sequence in 50% Dataset : 80

Number of Sequence in Full Dataset : 139

Average sequence length: 258.5

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07034	B8P146_POSPM_11_122	75.9

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07034	D5GJ08_TUBMM_41_347	100

Sequence based PCA Plot of the family - PF07034 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=19 Length=8
Motif2 Start=10 Length=8
Motif3 Start=1 Length=8
Motif4 Start=292 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay