3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF07029

Details:

PFam ID : PF07029

PFam Domain Description : CryBP1 protein

Number of Sequence in 50% Dataset : 11

Number of Sequence in Full Dataset : 24

Average sequence length: 145.6

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07029	C2YJG0_BACCE_1_145	10

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07029	C9K1L6_BACTU_53_215	100

Sequence based PCA Plot of the family - PF07029 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=1 Length=8
Motif2 Start=17 Length=27

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay