3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF06983

Details:

PFam ID : PF06983

PFam Domain Description : 3-demethylubiquinone-9 3-methyltransferase

Number of Sequence in 50% Dataset : 110

Number of Sequence in Full Dataset : 792

Average sequence length: 124.3

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06983	B1Y1C6_LEPCP_3_144	94.4

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06983	B1Y1C6_LEPCP_3_144	100

Sequence based PCA Plot of the family - PF06983 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay