3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF06861

Details:

PFam ID : PF06861

PFam Domain Description : BALF1 protein

Number of Sequence in 50% Dataset : 6

Number of Sequence in Full Dataset : 9

Average sequence length: 151.4

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06861	B6JVZ4_SCHJY_205_263	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06861	Q99F66_CHV12_1_182	100

Sequence based PCA Plot of the family - PF06861 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=1 Length=8
Motif2 Start=19 Length=27

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay