3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF06757

Details:

PFam ID : PF06757

PFam Domain Description : Insect allergen related repeat, nitrile-specifier detoxification

Number of Sequence in 50% Dataset : 41

Number of Sequence in Full Dataset : 156

Average sequence length: 177.2

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06757	B4K1E2_DROGR_1_168	12.5

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06757	E2A6E1_9HYME_212_398	100

Sequence based PCA Plot of the family - PF06757 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=22 Length=8
Motif2 Start=13 Length=8
Motif3 Start=173 Length=8
Motif4 Start=4 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay