3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF06750

Details:

PFam ID : PF06750

PFam Domain Description : Bacterial Peptidase A24 N-terminal domain

Number of Sequence in 50% Dataset : 57

Number of Sequence in Full Dataset : 775

Average sequence length: 93.2

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06750	A6CN91_9BACI_1_47	98.2

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06750	B1XYT9_LEPCP_20_156	100

Sequence based PCA Plot of the family - PF06750 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=14 Length=18
Motif2 Start=2 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay