3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF06723

Details:

PFam ID : PF06723

PFam Domain Description : MreB/Mbl protein

Number of Sequence in 50% Dataset : 67

Number of Sequence in Full Dataset : 901

Average sequence length: 317.4

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06723	Q2J5E4_FRASC_108_184	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06723	D7CRG6_TRURR_30_364	100

Sequence based PCA Plot of the family - PF06723 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=323 Length=8
Motif2 Start=285 Length=8
Motif3 Start=67 Length=11
Motif4 Start=2 Length=11

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay