3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF06671

Details:

PFam ID : PF06671

PFam Domain Description : Repeat of unknown function (DUF1174)

Number of Sequence in 50% Dataset : 3

Number of Sequence in Full Dataset : 29

Average sequence length: 25.1

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06671	E4X661_OIKDI_149_245	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06671	E3LFD4_CAERE_1196_1218	100

Sequence based PCA Plot of the family - PF06671 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay