3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF06669

Details:

PFam ID : PF06669

PFam Domain Description : Xylella fastidiosa surface protein related

Number of Sequence in 50% Dataset : 3

Number of Sequence in Full Dataset : 13

Average sequence length: 61.3

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06669	E4X661_OIKDI_149_245	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06669	C8KZV4_9PAST_735_802	100

Sequence based PCA Plot of the family - PF06669 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay