3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF06664

Details:

PFam ID : PF06664

PFam Domain Description : Wnt-binding factor required for Wnt secretion

Number of Sequence in 50% Dataset : 63

Number of Sequence in Full Dataset : 112

Average sequence length: 247.2

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06664	B0E5R1_ENTDI_117_397	91.9

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06664	B0EP03_ENTDI_153_441	100

Sequence based PCA Plot of the family - PF06664 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 3 motifs

Motif1 Start=10 Length=18
Motif2 Start=1 Length=8
Motif3 Start=52 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay