3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF06661

Details:

PFam ID : PF06661

PFam Domain Description : VirE3

Number of Sequence in 50% Dataset : 7

Number of Sequence in Full Dataset : 11

Average sequence length: 225.8

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06661	B5Y4S6_PHATC_26_211	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06661	Q1M9Y7_RHIL3_43_357	100

Sequence based PCA Plot of the family - PF06661 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay