3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF06652

Details:

PFam ID : PF06652

PFam Domain Description : Methuselah N-terminus

Number of Sequence in 50% Dataset : 32

Number of Sequence in Full Dataset : 95

Average sequence length: 152.0

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06652	B4Q8R3_DROSI_234_373	93.5

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06652	B3LVZ1_DROAN_28_208	100

Sequence based PCA Plot of the family - PF06652 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=17 Length=8
Motif2 Start=1 Length=8
Motif3 Start=142 Length=8
Motif4 Start=52 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay