3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF06589

Details:

PFam ID : PF06589

PFam Domain Description : Circumsporozoite-related antigen (CRA)

Number of Sequence in 50% Dataset : 5

Number of Sequence in Full Dataset : 8

Average sequence length: 107

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06589	E6ZYW8_9BASI_25_71	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06589	Q7RGC6_PLAYO_3_160	100

Sequence based PCA Plot of the family - PF06589 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay