3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF06559

Details:

PFam ID : PF06559

PFam Domain Description : 2'-deoxycytidine 5'-triphosphate deaminase (DCD)

Number of Sequence in 50% Dataset : 14

Number of Sequence in Full Dataset : 135

Average sequence length: 287.3

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06559	E8JI64_9ACTO_78_205	15.3

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06559	Q15Z30_PSEA6_1_172	100

Sequence based PCA Plot of the family - PF06559 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=90 Length=8
Motif2 Start=4 Length=8
Motif3 Start=63 Length=8
Motif4 Start=30 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay