3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF06522 Details: PFam ID : PF06522 PFam Domain Description : NADH-ubiquinone reductase complex 1 MLRQ subunit Number of Sequence in 50% Dataset : 39 Number of Sequence in Full Dataset : 181 Average sequence length: 68.7 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF06522E9C1Q2_9EUKA_12_6363.1 HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF06522D0MWF1_PHYIT_17_9998.8 Sequence based PCA Plot of the family - PF06522 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 3 motifsMotif1 Start=19 Length=18Motif2 Start=10 Length=8Motif3 Start=1 Length=8 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF06522
PFam Domain Description : NADH-ubiquinone reductase complex 1 MLRQ subunit
Number of Sequence in 50% Dataset : 39
Number of Sequence in Full Dataset : 181
Average sequence length: 68.7
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER