3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF06491

Details:

PFam ID : PF06491

PFam Domain Description : Disulphide isomerase

Number of Sequence in 50% Dataset : 3

Number of Sequence in Full Dataset : 127

Average sequence length: 133.6

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06491	B3PEX8_CELJU_6_127	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06491	Q4MIL4_BACCE_1_100	100

Sequence based PCA Plot of the family - PF06491 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 3 motifs

Motif1 Start=24 Length=8
Motif2 Start=15 Length=8
Motif3 Start=6 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay