3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF06449

Details:

PFam ID : PF06449

PFam Domain Description : Mitochondrial domain of unknown function (DUF1082)

Number of Sequence in 50% Dataset : 2

Number of Sequence in Full Dataset : 17

Average sequence length: 47.4

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06449	B4L7C7_DROMO_934_1074	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06449	D7RMV3_9CARY_95_141	100

Sequence based PCA Plot of the family - PF06449 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay