3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF06435

Details:

PFam ID : PF06435

PFam Domain Description : Repeat of unknown function (DUF1079)

Number of Sequence in 50% Dataset : 4

Number of Sequence in Full Dataset : 16

Average sequence length: 27.6

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06435	D9QT39_ACEAZ_176_372	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06435	F1WW93_MORCA_313_342	40

Sequence based PCA Plot of the family - PF06435 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay