3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF06367

Details:

PFam ID : PF06367

PFam Domain Description : Diaphanous FH3 Domain

Number of Sequence in 50% Dataset : 118

Number of Sequence in Full Dataset : 285

Average sequence length: 181.1

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06367	B9WKK2_CANDC_541_690	74.3

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06367	B6JZB4_SCHJY_270_456	99.6

Sequence based PCA Plot of the family - PF06367 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=164 Length=8
Motif2 Start=143 Length=8
Motif3 Start=45 Length=8
Motif4 Start=61 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay