3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF06347

Details:

PFam ID : PF06347

PFam Domain Description : Bacterial SH3 domain

Number of Sequence in 50% Dataset : 129

Number of Sequence in Full Dataset : 424

Average sequence length: 55.0

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06347	B3SCG7_TRIAD_70_207	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06347	B2KB61_ELUMP_89_150	100

Sequence based PCA Plot of the family - PF06347 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=36

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay