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3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF06336
Details:

PFam ID : PF06336

PFam Domain Description : Coronavirus 5a protein

Number of Sequence in 50% Dataset : 3

Number of Sequence in Full Dataset : 19

Average sequence length: 59.1

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:
Pfam IDBest ProfileCoverage of Best Profile
PF06336A7H7Y9_ANADF_7_145No suitable BRS could be identified
HMMER Based Coverage Results:
Pfam IDBest ProfileCoverage of Best Profile
PF06336Q91QS8_IBVBU_1_65100
Sequence based PCA Plot of the family - PF06336 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:
Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay