3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF06334

Details:

PFam ID : PF06334

PFam Domain Description : Orthopoxvirus A47 protein

Number of Sequence in 50% Dataset : 3

Number of Sequence in Full Dataset : 3

Average sequence length: 99.3

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06334	Q5C2F1_SCHJA_1_221	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06334	Q6RZD5_9POXV_1_244	100

Sequence based PCA Plot of the family - PF06334 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay