3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF06292

Details:

PFam ID : PF06292

PFam Domain Description : Domain of Unknown Function (DUF1041)

Number of Sequence in 50% Dataset : 13

Number of Sequence in Full Dataset : 63

Average sequence length: 93.1

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06292	B3N0W5_DROAN_68_103	58.3

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06292	B3RUJ9_TRIAD_728_820	100

Sequence based PCA Plot of the family - PF06292 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=1 Length=18
Motif2 Start=22 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay