3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF06291

Details:

PFam ID : PF06291

PFam Domain Description : Bor protein

Number of Sequence in 50% Dataset : 20

Number of Sequence in Full Dataset : 47

Average sequence length: 89.2

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06291	B0MWT0_9BACT_1_51	57.8

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06291	C6ZB01_9BACE_25_126	100

Sequence based PCA Plot of the family - PF06291 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 3 motifs

Motif1 Start=10 Length=18
Motif2 Start=1 Length=8
Motif3 Start=88 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay