3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF06277 Details: PFam ID : PF06277 PFam Domain Description : Ethanolamine utilisation protein EutA Number of Sequence in 50% Dataset : 29 Number of Sequence in Full Dataset : 73 Average sequence length: 408.1 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF06277Q8TY55_METKA_195_32282.1 HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF06277E5XIE6_9FIRM_2_492100 Sequence based PCA Plot of the family - PF06277 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 4 motifsMotif1 Start=40 Length=8Motif2 Start=19 Length=8Motif3 Start=132 Length=8Motif4 Start=151 Length=8 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF06277
PFam Domain Description : Ethanolamine utilisation protein EutA
Number of Sequence in 50% Dataset : 29
Number of Sequence in Full Dataset : 73
Average sequence length: 408.1
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER