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3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF06277
Details:

PFam ID : PF06277

PFam Domain Description : Ethanolamine utilisation protein EutA

Number of Sequence in 50% Dataset : 29

Number of Sequence in Full Dataset : 73

Average sequence length: 408.1

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:
Pfam IDBest ProfileCoverage of Best Profile
PF06277Q8TY55_METKA_195_32282.1
HMMER Based Coverage Results:
Pfam IDBest ProfileCoverage of Best Profile
PF06277E5XIE6_9FIRM_2_492100
Sequence based PCA Plot of the family - PF06277 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=40 Length=8
Motif2 Start=19 Length=8
Motif3 Start=132 Length=8
Motif4 Start=151 Length=8
Download PSSM/HMM Models/Alignment:
Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay