3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF06266

Details:

PFam ID : PF06266

PFam Domain Description : HrpF protein

Number of Sequence in 50% Dataset : 8

Number of Sequence in Full Dataset : 16

Average sequence length: 69.0

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06266	C6XRS9_HIRBI_36_130	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06266	A4XN84_PSEMY_1_74	100

Sequence based PCA Plot of the family - PF06266 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay