3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF06249

Details:

PFam ID : PF06249

PFam Domain Description : Ethanolamine utilisation protein EutQ

Number of Sequence in 50% Dataset : 23

Number of Sequence in Full Dataset : 122

Average sequence length: 122.4

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06249	C1ASA7_RHOOB_19_131	13.6

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06249	C1ASA7_RHOOB_19_131	100

Sequence based PCA Plot of the family - PF06249 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=37

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay