3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF06211

Details:

PFam ID : PF06211

PFam Domain Description : BMP and activin membrane-bound inhibitor (BAMBI) N-terminal domain

Number of Sequence in 50% Dataset : 9

Number of Sequence in Full Dataset : 18

Average sequence length: 95.3

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06211	E9HPX6_DAPPU_212_318	100

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06211	E9HPX6_DAPPU_212_318	100

Sequence based PCA Plot of the family - PF06211 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=29 Length=8
Motif2 Start=10 Length=8
Motif3 Start=1 Length=8
Motif4 Start=20 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay