3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF06117

Details:

PFam ID : PF06117

PFam Domain Description : Enterobacterial protein of unknown function (DUF957)

Number of Sequence in 50% Dataset : 3

Number of Sequence in Full Dataset : 16

Average sequence length: 59.1

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06117	E0VP60_PEDHC_94_246	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06117	B3WHF6_ECOLX_1_57	100

Sequence based PCA Plot of the family - PF06117 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay