3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF06102

Details:

PFam ID : PF06102

PFam Domain Description : Domain of unknown function (DUF947)

Number of Sequence in 50% Dataset : 58

Number of Sequence in Full Dataset : 149

Average sequence length: 166.6

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06102	Q4T2J9_TETNG_63_130	87.7

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06102	F0XLT7_9PEZI_90_300	100

Sequence based PCA Plot of the family - PF06102 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=155 Length=8
Motif2 Start=124 Length=8
Motif3 Start=56 Length=8
Motif4 Start=39 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay