3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF06096

Details:

PFam ID : PF06096

PFam Domain Description : Baculoviridae 8.2 KDa protein

Number of Sequence in 50% Dataset : 4

Number of Sequence in Full Dataset : 23

Average sequence length: 61.2

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06096	C3TWW8_9ABAC_9_66	33.3

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06096	Q9PYN6_GVXN_4_70	100

Sequence based PCA Plot of the family - PF06096 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=10 Length=27
Motif2 Start=1 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay