3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF06067

Details:

PFam ID : PF06067

PFam Domain Description : Domain of unknown function (DUF932)

Number of Sequence in 50% Dataset : 49

Number of Sequence in Full Dataset : 230

Average sequence length: 215.2

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06067	A3XJ24_LEEBM_43_274	87.5

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06067	C4ZMQ9_THASP_76_331	100

Sequence based PCA Plot of the family - PF06067 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 3 motifs

Motif1 Start=205 Length=8
Motif2 Start=1 Length=18
Motif3 Start=88 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay