3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF06064

Details:

PFam ID : PF06064

PFam Domain Description : Host-nuclease inhibitor protein Gam

Number of Sequence in 50% Dataset : 4

Number of Sequence in Full Dataset : 11

Average sequence length: 74.7

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06064	A3Y6Y6_9GAMM_1_126	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06064	D7JKF5_ECOLX_23_105	90

Sequence based PCA Plot of the family - PF06064 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay