3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF06051

Details:

PFam ID : PF06051

PFam Domain Description : Domain of Unknown Function (DUF928)

Number of Sequence in 50% Dataset : 107

Number of Sequence in Full Dataset : 132

Average sequence length: 181.6

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06051	B2JAL5_NOSP7_86_230	98.1

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06051	B4WG09_9SYNE_66_296	100

Sequence based PCA Plot of the family - PF06051 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=13 Length=8
Motif2 Start=1 Length=11
Motif3 Start=183 Length=8
Motif4 Start=68 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay